業　績　＜Publications＞

2021.4～2022.3
原著論文 （Refereed original papers)

  • Kenji Itao and Kunihiko Kaneko. Emergence of Kinship Structures and Descent Systems: Multi-level Evolutionary Simulation and Empirical Data Analyses. Proceedings of the Royal Society B 289. 20212641. 2022

  • Yuma Fujimoto and Kunihiko Kaneko. Exploitation by asymmetry of information reference in coevolutionary learning in prisoner's dilemma game. Journal of Physics: Complexity. 2.4: 045007. 2021

  • Qian-Yuan Tang and Kunihiko Kaneko. Dynamics-evolution correspondence in protein structures. Phys. Rev. Lett. 127, 098103. 2021

  • Naoto Nishiura and Kunihiko Kaneko. Evolution of phenotypic fluctuation under host-parasite interactions. PLOS Computational Biology. 17.11: e1008694. 2021

  • Kenji Okubo and Kunihiko Kaneko. Evolution of dominance in gene expression pattern associated with phenotypic robustness. BMC Ecology and Evolution, 21. 110. 2021

  • Masayo Inoue, Kunihiko Kaneko. Entangled gene regulatory networks with cooperative expression endow robust adaptive responses to unforeseen environmental changes. Phys. Rev. Research. 3, 033183. 2021

  • Jumpei F. Yamgishi, Nen Saito, Kunihiko Kaneko. Adaptation of metabolite leakiness leads to symbiotic chemical exchange and to a resilient microbial ecosystem. PLoS Computational Biology. 17: e1009143. 2021

  • Kohei Ichikawa and Kunihiko Kaneko. Short term memory by transient oscillatory dynamics in recurrent neural networks. Phys. Rev. Research. 3, 033193. 2021

  • Kenji Itao, Kunihiko Kaneko. Evolution of family systems and resultant socio-economic structures. Humanities and Social Sciences Communications. 8.1: 1-11. 2021

  • T.Kurikawa and K.Kaneko. Multiple-Timescale Neural Networks: Generation of History-Dependent Sequences and Inference Through Autonomous Bifurcations. Frontiers in Computational Neuroscience. 15. 743537. 2021

  • N.Takeuchi, N. Mitarai, K. Kaneko. A scaling law of multilevel evolution: how the balance between within- and among-collective evolution is determined. Genetics. 220, iyab182. 2021

  • Yongtae Hwang, Takumi Washio, Toshiaki Hisada, Hideo Higuchi, and Motoshi Kaya. A reverse stroke characterizes the force generation of cardiac myofilaments, leading to an understanding of heart function. Proc. Natl. Acad. Sci. USA 118, e2011659118 (2021).

  • "Keiko Hirose, Hideo Higuchi, Shimaa A Abdellatef, Hisashi Tadakuma, Kangmin Yan, Takashi Fujiwara, Kodai Fukumoto, Yuichi Kondo, Hiroko Takazaki, Rofia Boudria, Takuo Yasunaga． Oscillatory movement of a dynein-microtubule complex crosslinked with DNA origami．biorxiv(2021)"

  • Elevated Sporulation Efficiency in Fission Yeast Schizosaccharomyces japonicus Strains Isolated from Drosophila. Seike T, Sakata N, Matsuda F, Furusawa C. J Fungi (Basel). 2021 Apr 29;7(5):350.

  • Laboratory evolution of Mycobacterium on agar plates for analysis of resistance acquisition and drug sensitivity profiles. Maeda T, Kawada M, Sakata N, Kotani H, Furusawa C. Sci Rep. 2021 Jul 23;11(1):15136.

  • Mutational property of newly identified mutagen l-glutamic acid γ-hydrazide in Escherichia coli. Maeda T, Shibai A, Yokoi N, Tarusawa Y, Kawada M, Kotani H, Furusawa C. Mutat Res. 2021 Jul 21;823:111759.

  • The sixth transmembrane region of a pheromone G-protein coupled receptor, Map3, is implicated in discrimination of closely related pheromones in Schizosaccharomyces pombe. Seike T, Sakata N, Shimoda C, Niki H, Furusawa C. Genetics. 2021 Dec 10;219(4):iyab150.

  • Acceleration of target production in co-culture by enhancing intermediate consumption through adaptive laboratory evolution. Kawai R, Toya Y, Miyoshi K, Murakami M, Niide T, Horinouchi T, Maeda T, Shibai A, Furusawa C, Shimizu H. Biotechnol Bioeng. 2022 Mar;119(3):936-945.

  • Decoding gut microbiota by imaging analysis of fecal samples. Furusawa C, Tanabe K, Ishii C, Kagata N, Tomita M, Fukuda S. iScience. 2021 Nov 22;24(12):103481.

  • Experimental demonstration of operon formation catalyzed by insertion sequence. Kanai Y, Tsuru S, Furusawa C. Nucleic Acids Res. 2022 Jan 24:gkac004.

  • Identification of Bacterial Drug-Resistant Cells by the Convolutional Neural Network in Transmission Electron Microscope Images. Hayashi-Nishino M, Aoki K, Kishimoto A, Takeuchi Y, Fukushima A, Uchida K, Echigo T, Yagi Y, Hirose M, Iwasaki K, Shin’ya E, Washio T, Furusawa C, Nishino K. Front Microbiol. 2022; 13:839718.

  • Potential contribution of intrinsic developmental stability toward body plan conservation. Uchida Y, Shigenobu S, Takeda H, Furusawa C, Irie N, BMC Biology, in press

  • K. Yoshimura and S. Ito, “Thermodynamic uncertainty relation and thermodynamic speed limit in deterministic chemical reaction networks”, Phys. Rev. Lett. 127, 160601 (2021).

  • M. Nakazato and S. Ito, “Geometrical aspects of entropy production in stochastic thermodynamics based on Wasserstein distance”, Phys. Rev. Res. 3, 043093 (2021).

  • S. Ito, “Information geometry, trade-off relations, and generalized Glansdorff–Prigogine criterion for stability”, J. Phys. A. 55, 054001 (2022).

  • A. Dechant, S. Sasa, S. Ito, “Geometric decomposition of entropy production in out-of-equilibrium systems”, Phys. Rev. Res. 4, L012034 (2022).

  • A Kolchinsky, “A Novel Approach to the Partial Information Decomposition,” Entropy, 24, 403 (2022).

  • Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Yasuhisa Fujita, Ming Li, Roger S. Zoh, Kazuyuki Aihara, Taiga Miyazaki, Takaji Wakita and Shingo Iwami: "Time Variation in the Probability of Failing to Detect a Case of Polymerase Chain Reaction Testing for SARS-CoV-2 as Estimated from a Viral Dynamics Model,” Journal of the Royal Society Interface, Vol.8, No.177, 20200947, pp.1-7 (2021).

  • Hirofumi Ohashi, Koichi Watashi, Wakana Saso, Kaho Shionoya, Shoya Iwanami, Takatsugu Hirokawa, Tsuyoshi Shirai, Shigehiko Kanaya, Yusuke Ito, Kwang Su Kim, Takao Nomura, Tateki Suzuki, Kazane Nishioka, Shuji Ando, Keisuke Ejima, Yoshiki Koizumi, Tomohiro Tanaka, Shin Aoki, Kouji Kuramochi, Tadaki Suzuki, Takao Hashiguchi, Katsumi Maenaka, Tetsuro Matano, Masamichi Muramatsu, Masayuki Saijo, Kazuyuki Aihara, Shingo Iwami, Makoto Takeda, Jane A. McKeating, and Takaji Wakita: "Potential anti-COVID-19 Agents, Cepharanthine and Nelfinavir, and their Usage for Combination Treatment," iScience, Vol.24, No.4, 102367, pp.1-14 (2021).

  • Takahiro Inagaki, Kensuke Inaba, Timothée Leleu, Toshimori Honjo, Takuya Ikuta, Koji Enbutsu, Takeshi Umeki, Ryoichi Kasahara, Kazuyuki Aihara, and Hiroki Takesue: "Collective and Synchronous Dynamics of Photonic Spiking Neurons," Nature Communications, Vol.12, Article No.2325, pp.1-8 (2021).

  • Seiji Uenohara and Kazuyuki Aihara: "Time-Domain Digital-to-Analog Converter for Spiking Neural Network Hardware," Circuits, Systems, and Signal Processing, Vol.40, 2763-2781 (2021).

  • Keisuke Ejima, Kwang Su Kim, Christina Ludema, Ana I. Bento, Shoya Iwanami, Yasuhisa Fujita, Hirofumi Ohashi, Yoshiki Koizumi, Koichi Watashi, Kazuyuki Aihara, Hiroshi Nishiurai, and Shingo Iwami: "Estimation of the Incubation Period of COVID-19 using Viral Load Data," Epidemics, Vol.35, 100454, pp.1-6 (2021).

  • Shoya Iwanami, Keisuke Ejima, Kwang Su Kim, Koji Noshita, Yasuhisa Fujita, Taiga Miyazaki, Shigeru Kohno, Yoshitsugu Miyazaki, Shimpei Morimoto, Shinji Nakaoka, Yoshiki Koizumi, Yusuke Asai, Kazuyuki Aihara, Koichi Watashi, Robin N. Thompson, Kenji Shibuya, Katsuhito Fujiu, Alan S. Perelson, Shingo Iwami, Takaji Wakita: "Detection of Significant Antiviral Drug Effects on COVID-19 with Reasonable Sample Sizes in Randomized Controlled Trials: A Modeling Study," PLOS Medicine, Vol.18, No.7, e1003660, pp.1-20 (2021).

  • Yong Dam Jeong, Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Ana I. Bento, Yasuhisa Fujita, Il Hyo Jung, Kazuyuki Aihara, Koichi Watashi, Taiga Miyazaki, Takaji Wakita, Shingo Iwami, and Marco Ajelli: "Revisiting the Guidelines for Ending Isolation for COVID-19 Patients," eLife, Vol.10, e69340, pp.1-20 (2021).

  • Komei Kurasawa, Kota Hashimoto, Aohan Li, Koya Sato, Kensuke Inaba, Hiroki Takesue, Kazuyuki Aihara, and Mikio Hasegawa: "A High-Speed Channel Assignment Algorithm for Dense IEEE 802.11 Systems via Coherent Ising Machine," IEEE Wireless Communications Letters, Vol.10, No.8, pp.1682-1686 (2021).

  • Yoshito Hirata, José M. Amigó, Shunsuke Horai, Kazuhiko Ogimoto, and Kazuyuki Aihara: "Forecasting Wind Power Ramps with Prediction Coordinates," Chaos, Vol.31, No.10, Article No.103105, pp.1-7 (2021).

  • Hiroshi Yamashita, Hideyuki Suzuki, and Kazuyuki Aihara: "Accelerating Numerical Simulation of Continuous-Time Boolean Satisfiability Solver Using Discrete Gradient," Communications in Nonlinear Science and Numerical Simulation, Vol.102, 105908, pp.1-14 (2021).

  • Rui Liu, Jiayuan Zhong, Renhao Hong, Ely Chen, Kazuyuki Aihara, Pei Chen, and Luonan Chen: "Predicting Local COVID-19 Outbreaks and Infectious Disease Epidemics based on Landscape Network Entropy," Science Bulletin, Vol.66, No.22, pp.2265-2270 (2021).

  • Timothée Leleu, Farad Khoyratee, Timothée Levi, Ryan Hamerly, Takashi Kohno, and Kazuyuki Aihara: "Scaling Advantage of Chaotic Amplitude Control for High-performance Combinatorial Optimization," Communications Physics, Vol.4, Article No.266, pp.1-10 (2021).

  • Kazuyuki Aihara, Rui Liu, Keiichi Koizumi, Xiaoping Liu, and Luonan Chen: "Dynamical Network Biomarkers: Theory and Application,” Gene, Vol. 808, Article No.145997, pp.1-10 (2022).

  • Jifan Shi, Kenji Kirihara, Mariko Tada, Mao Fujioka, Kaori Usui, Daisuke Koshiyama, Tsuyoshi Araki, Luonan Chen, Kiyoto Kasai, and Kazuyuki Aihara: "Criticality in the Healthy Brain," Frontier in Network Physiology, Vol.1, Article No.755685, pp.1-9 (2022).

  • Jifan Shi, Luonan Chen and Kazuyuki Aihara: "Embedding Entropy: A Nonlinear Measure of Dynamical Causality," Journal of the Royal Society Interface, Vol.19, No.188, Article No.20210766, pp.1-12 (2022).

  • J. Hoshiyama, Y. Okada, Y. Hayata, A. Eguchi, R. Ueki, S. Sando Characterization of a DNA Aptamer with High Specificity toward Fibroblast Growth Factor Receptor 1 Chem. Lett. 50, 1949 (2021)

  • A. Kohata, R. Ueki, K. Okuro, P. K. Hashim, S. Sando, T. Aida Photoreactive Molecular Glue for Enhancing the Efficacy of DNA Aptamers by Temporary-to-Permanent Conjugation with Target Proteins J. Am. Chem. Soc. 143, 13937 (2021)

  • M. Akiyama, R. Ueki, M. Yanagawa, M. Abe, M. Hiroshima, Y. Sako, S. Sando DNA‐based Synthetic Growth Factor Surrogates with Fine‐tuned Agonism Angew. Chem. Int. Ed. 60, 22745 (2021)

  • A. Eguchi, A. Ueki, J. Hoshiyama, K. Kuwata, Y. Chikaoka, T. Kawamura, S. Nagatoishi, K. Tsumoto, R. Ueki, S. Sando A DNA Aptamer That Inhibits the Aberrant Signaling of Fibroblast Growth Factor Receptor in Cancer Cells JACS Au, 1, 578 (2021)

  • R. Ueki, S. Hayashi, M. Tsunoda, M. Akiyama, H. Liu, T. Ueno, Y. Urano, S. Sando Nongenetic control of receptor signaling dynamics with a DNA-based optochemical tool Chem. Commun. 48, 5969 (2021)

  • "Mizuuchi, R.*, Furubayashi, T., Ichihashi, N.* (*co-corresponding) Evolutionary transition from a single RNA replicator to a multiple replicator network Nature Communications, 13, 1460 (2022)"

  • "Yukawa, K., Mizuuchi, R., Ichihashi, N.* Relaxed Substrate Specificity in Qβ Replicase through Long-Term In Vitro Evolution Life, 12(1), 32 (2021) "

  • "Okauchi, H., Ichihashi, N.* Continuous cell-free replication and evolution of artificial genomic DNA in a compartmentalized gene expression system ACS Synthetic Biology, 10, 3507–3517 (2021)"

  • "Tsuji, G.*, Sunami, T., Oki, M., Ichihashi, N. Exchange of Proteins in Liposomes through Streptolysin O Pores. ChemBioChem 22, 1966-1973 (2021)"

  • Koganezawa, Y., Umetani, M., Sato, M., Wakamoto, Y. History-Dependent Physiological Adaptation to Lethal Genetic Modification under Antibiotic Exposure. eLife. 2022;11:e74486. (2021)

  • Shimaya, T., Okura, R., Wakamoto, Y., Takeuchi, K. A. Scale invariance of cell size fluctuations in starving bacteria. Communications Physics, 4:238. (2021)

  • Takehiro Tottori, Tetsuya J. Kobayashi, Forward and Backward Bellman Equations Improve the Efficiency of the EM Algorithm for DEC-POMDP, Entropy, 23(5), p.551, 2021

  • Atsushi Kamimura, Tetsuya J. Kobayashi, Representation and inference of size control laws by neural-network-aided point processes, Physical Review Research, 3, 33032, 2021

  • So Nakashima,Tetsuya J. Kobayashi, Acceleration of evolutionary processes by learning and extended Fisher's fundamental theorem, Physical Review Research, 1(4), 13069, 2021

  • Kento Nakamura, Tetsuya J. Kobayashi, Optimal sensing and control of run-and-tumble chemotaxis, Physical Review Research. 4, 13120, 2022

  • Takagi T, Ueno T, Ikawa K, Asanuma D, Nomura Y, Uno S, Komatsu T, Kamiya M, Hanaoka K, Okimura C, Iwadate Y, Hirose K, Nagano T, Sugimura K, and Urano Y. Discovery of an F-actin-binding small molecule serving as a fluorescent probe and a scaffold for functional probes. Science Advances 7, eabg8585 (2021)

  • R. Nishide and S. Ishihara, Pattern Propagation Driven by Surface Curvature. Phys. Rev. Lett. (Editors’ suggestion). in press

  • G. Ogita, T. Kondo, K. Ikawa, T. Uemura, S. Ishihara#, and K. Sugimura# (#corresponding authors) Image-based parameter inference for epithelial mechanics. PLoS Compt. Biol. in press

  • M. Tateno and S. Ishihara, Interfacial-curvature-driven coarsening in mass-conserved reaction-diffusion systems. Phys. Rev. Res. 3, 023198 (2021)

  • S. Nakayama, T. Yano , T. Namba, S. Konishi, M. Takagishi, E. Herawati, T. Nishida, Y. Imoto, S. Ishihara, M. Takahashi, K. Furuta, K. Oiwa, A. Tamura, S. Tsukita. Planar cell polarity induces local microtubule bundling for coordinated ciliary beating. J. Cell Biol. 220 (7), e20201003 (2021)

  • H. Yamamoto, T. Fujiwara, T. Funatsu, M. Tsunoda. Quantification of intracellular thiols by HPLC-fluorescence detection. Molecules, 26, 2365 (2021)

  • T. Ohtawa, A. Hattori, M. Isokawa, M. Harada, T. Funatsu, T. Ito, M. Tsunoda. Determination of intracellular 2-hydroxyglutarate enantiomers using two-dimensional liquid chromatography. Journal of Chromatography Open. 1, 100005 (2021)

  • Hirai H., Takemata N.., Tamura M., Ohta K. Facultative heterochromatin formation in rDNA is essential for cell survival during nutritional starvation. Nucleic Acids Res.50, 3727–3744 (2022)

  • Yasukawa T., Oda H.A., Namkamura T., Masuo N., Tamura M., Yamazaki T., Imura M., Yamada T., and Ohta K. TAQing2.0 for genome reorganization of asexual industrial yeasts by direct protein transfection. Commun. Biol. 5 , 144 (2022)

  • Y. Hara, H. Mizuno and A. Ikeda. Phase transition in the binary mixture of jammed particles with large size dispersity. Phys. Rev. Research 3, 023091 (2021)

  • N. Oyama, H. Mizuno and A. Ikeda. Unified view of avalanche criticality in sheared glasses. Phys. Rev. E 104, 015002 (2021)

  • N. Oyama, H. Mizuno and A. Ikeda. Instantaneous Normal Modes Reveal Structural Signatures for the Herschel-Bulkley Rheology in Sheared Glasses. Phys. Rev. Lett. 127, 108003 (2021)

  • H. Matsuyama, M. Toyoda, T. Kurahashi, A. Ikeda, T. Kawasaki and K. Miyazaki. Geometrical properties of mechanically annealed systems near the jamming transition. Euro. Phys. J. E 44, 133 (2021)

  • H. Mizuno, M. Hachiya and A. Ikeda. Structural, mechanical, and vibrational properties of particulate physical gels. J. Chem. Phys. 155, 234502 (2021)

  • D. Coslovich and A. Ikeda. Revisiting the single-saddle model for the β-relaxation of supercooled liquids. J. Chem. Phys. 156, 094503 (2022).

  • Kurata Y, Tanaka T, Cernecka H, Eitner F, Nangaku M. TRPM2 Plays a Minor Role in AKI and Kidney Fibrosis. Kidney360 3, 153-157, 2021

  • Hasegawa S, Okada A, Aso S, Kumazawa R, Matsui H, Fushimi K, Yasunaga H, Nangaku M. Association Between Diabetes and Major Bleeding Complications of Renal Biopsy. Kidney Int Rep 7, 232-240, 2021

  • Akizawa T, Nangaku M, Yamaguchi T, Koretomo R, Maeda K, Miyazawa Y, Hirakata H. A Phase 3 Study of Enarodustat (JTZ-951) in Japanese Hemodialysis Patients for Treatment of Anemia in Chronic Kidney Disease: SYMPHONY HD Study. Kidney Dis (Basel) 7, 494-502, 2021

  • Kikuchi K, Nangaku M, Ryuzaki M, Yamakawa T, Yoshihiro O, Hanafusa N, Sakai K, Kanno Y, Ando R, Shinoda T, Nakamoto H, Akizawa T; COVID-19 Task Force Committee of the Japanese Association of Dialysis Physicians, the Japanese Society for Dialysis Therapy, and the Japanese Society of Nephrology. Survival and predictive factors in dialysis patients with COVID-19 in Japan: a nationwide cohort study. Ren Replace Ther 7, 59, 2021

  • Ito S, Kashihara N, Shikata K, Nangaku M, Wada T, Okuda Y, Sawanobori T. Efficacy and safety of esaxerenone (CS-3150) in Japanese patients with type 2 diabetes and macroalbuminuria: a multicenter, single-arm, open-label phase III study. Clin Exp Nephrol 25, 1070-1078, 2021

  • Nagasu H, Yano Y, Kanegae H, Heerspink HJL, Nangaku M, Hirakawa Y, Sugawara Y, Nakagawa N, Tani Y, Wada J, Sugiyama H, Tsuruya K, Nakano T, Maruyama S, Wada T, Yamagata K, Narita I, Tamura K, Yanagita M, Terada Y, Shigematsu T, Sofue T, Ito T, Okada H, Nakashima N, Kataoka H, Ohe K, Okada M, Itano S, Nishiyama A, Kanda E, Ueki K, Kashihara N. Kidney Outcomes Associated With SGLT2 Inhibitors Versus Other Glucose-Lowering Drugs in Real-world Clinical Practice: The Japan Chronic Kidney Disease Database. Diabetes Care 44, 2542-2551, 2021

  • Nangaku M, Kondo K, Takabe S, Ueta K, Kaneko G, Otsuka M, Kawaguchi Y, Komatsu Y. Vadadustat for anemia in chronic kidney disease patients on peritoneal dialysis: A phase 3 open-label study in Japan. Ther Apher Dial 25, 642-653, 2021

  • Kawai Y, Sankoda A, Waki K, Miyake K, Hayashi A, Mieno M, Wakui H, Tsurutani Y, Saito J, Hirawa N, Yamakawa T, Komiya S, Isogawa A, Satoh S, Minami T, Osada U, Iwamoto T, Takano T, Terauchi Y, Tamura K, Yamauchi T, Kadowaki T, Nangaku M, Kashihara N, Ohe K. Efficacy of the Self-management Support System DialBetesPlus for Diabetic Kidney Disease: Protocol for a Randomized Controlled Trial. JMIR Res Protoc 10, e31061 , 2021

  • Kurakawa KI, Okada A, Manaka K, Konishi T, Jo T, Ono S, Uda K, Michihata N, Matsui H, Fushimi K, Yamaguchi S, Yamauchi T, Nangaku M, Yasunaga H, Kadowaki T. Clinical characteristics and incidences of benign and malignant insulinoma using a national inpatient database in Japan. J Clin Endocrinol Metab 106, 3477-3486, 2021

  • Fujii R, Hasegawa S, Maekawa H, Inoue T, Yoshioka K, Uni R, Ikeda Y, Nangaku M, Inagi R. Decreased IFT88 expression with primary cilia shortening causes mitochondrial dysfunction in cisplatin-induced tubular injury. Am J Physiol Renal Physiol 321, F278-F292, 2021

  • Matsuura R, Yamashita T, Hayase N, Hamasaki Y, Noiri E, Numata G, Takimoto E, Nangaku M, Doi K. Preexisting heart failure with reduced ejection fraction attenuates renal fibrosis after ischemia reperfusion via sympathetic activation. Sci Rep 11, 15091, 2021

  • Doi K, Kimura H, Wada T, Tanaka T, Hiromura K, Saleem MA, Inagi R, Nangaku M, Fujii T. A novel method for successful induction of interdigitating process formation in conditionally immortalized podocytes from mice, rats, and humans. Biochem Biophys Res Commun 570, 47-52, 2021

  • Momose A, Yamaguchi S, Okada A, Ikeda-Kurakawa K, Namiki D, Nannya Y, Kato H, Yamauchi T, Nangaku M, Kadowaki T. Factors associated with long-term care certification in older adults: a cross-sectional study based on a nationally representative survey in Japan. BMC Nephrol 21, 374, 2021

  • Ito S, Kashihara N, Shikata K, Nangaku M, Wada T, Okuda Y, Sawanobori T. Efficacy and safety of esaxerenone (CS-3150) in Japanese patients with type 2 diabetes and macroalbuminuria: a multicenter, single-arm, open-label phase III study. Clin Exp Nephrol 25, 1070-1078, 2021

  • Manaka K, Sato J, Takeuchi M, Watanabe K, Kage H, Kawai T, Sato Y, Miyagawa T, Yamada D, Kume H, Sato S, Nagase T, Iiri T, Nangaku M, Makita N. Immune checkpoint inhibitor combination therapies very frequently induce secondary adrenal insufficiency. Sci Rep 11, 11617, 2021

  • Sugawara Y, Iwagami M, Yoshida Y, Kikuchi K, Ando R, Shinoda T, Ryuzaki M, Nakamoto H, Sakai K, Hanafusa N, Kashihara N, Nangaku M; COVID-19 Task Force Committee of the Japanese Association of Dialysis Physicians; Japanese Society for Dialysis Therapy; and the Japanese Society of Nephrology. Nationwide survey of the coronavirus disease 2019 prevention and treatment systems for kidney disease patients: a study of Japanese Society of Nephrology-certified educational facilities. Clin Exp Nephrol 25, 996-1002, 2021

  • Sugawara Y, Iwagami M, Kikuchi K, Yoshida Y, Ando R, Shinoda T, Ryuzaki M, Nakamoto H, Sakai K, Hanafusa N, Kashihara N, Nangaku M; COVID-19 Task Force Committee of the Japanese Association of Dialysis Physicians, the Japanese Society for Dialysis Therapy, and the Japanese Society of Nephrology. Infection prevention measures for patients undergoing hemodialysis during the COVID-19 pandemic in Japan: a nationwide questionnaire survey. Ren Replace Ther 7, 27, 2021

  • Kotani A, Oda Y, Hirakawa Y, Nakamura M, Hamasaki Y, Nangaku M. Peritoaneal Dialysis-related Peritonitis Caused by Streptococcus oralis. Intern Med 60, 3447-3452, 2021

  • Kanai H, Nangaku M, Nagai R, Okuda N, Kurata K, Nagakubo T, Endo Y, Cobitz A. Efficacy and Safety of Daprodustat in Japanese Peritoneal Dialysis Patients. Ther Apher Dial 25, 979-987, 2021

  • Inoue K, DeJong C, Nangaku M. Trends in the Use of Angiotensin-Converting Enzyme Inhibitor and Angiotensin-II Receptor Blocker Among United States Adults From 1999 to 2018. Endocr Pract 27, 503-504, 2021

  • Kato H, Koga M, Kinoshita Y, Taniguchi Y, Kobayashi H, Fukumoto S, Nangaku M, Makita N, Ito N. Incidence of complications in 25 adult patients with X-linked hypophosphatemia. J Clin Endocrinol Metab 106, e3682-e3692, 2021

  • Higashihara T, Nishi H, Takemura K, Watanabe H, Maruyama T, Inagi R, Tanaka T, Nangaku M. β2-adrenergic receptor agonist counteracts skeletal muscle atrophy and oxidative stress in uremic mice. Sci Rep 11, 9130, 2021

  • Okada A, Yamana H, Morita K, Sato Y, Yamaguchi S, Kurakawa KI, Michihata N, Matsui H, Fushimi K, Nangaku M, Yamauchi T, Yasunaga H, Kadowaki T. Potassium concentration in initial fluid therapy and in-hospital mortality of patients with diabetic ketoacidosis. J Clin Endocrinol Metab 106, e2162-e2175, 2021

  • Hasegawa T, Zhao J, Bieber B, Zee J, Pisoni RL, Robinson BM, Hanafusa N, Nangaku M. Association between Dipeptidyl Peptidase-4 Inhibitor Prescription and Erythropoiesis-Stimulating Agent Hyporesponsiveness in Hemodialysis Patients with Diabetes Mellitus. Kidney Blood Press Res 46, 352-361, 2021

  • Nangaku M, Kondo K, Kokado Y, Ueta K, Kaneko G, Tandai T, Kawaguchi Y, Komatsu Y. Phase 3 Randomized Study Comparing Vadadustat with Darbepoetin Alfa for Anemia in Japanese Patients with Nondialysis-Dependent CKD. J Am Soc Nephrol 32, 1779-1790, 2021

  • Hasegawa S, Inoue T, Nakamura Y, Fukaya D, Uni R, Wu CH, Fujii R, Peerapanyasut W, Taguchi A, Kohro T, Yamada S, Katagiri M, Ko T, Nomura S, Nakanishi Ozeki A, Susaki EA, Ueda HR, Akimitsu N, Wada Y, Komuro I, Nangaku M, Inagi R. Activation of Sympathetic Signaling in Macrophages Blocks Systemic Inflammation and Protects against Renal Ischemia-Reperfusion Injury. J Am Soc Nephrol 32, 1599-1615, 2021

  • Tomura M, Hamasaki Y, Komaru Y, Miyamoto Y, Matsuura R, Matsumoto A, Doi K, Kume H, Nangaku M. Prognostic significance of concentric left ventricular hypertrophy at peritoneal dialysis initiation. BMC Nephrol 22, 135, 2021

  • Miyano S, Michihata N, Sada KE, Uda K, Matsui H, Fushimi K, Nangaku M, Yasunaga H. Comparison of fracture risk between proton pump inhibitors and histamine-2 receptor antagonists in ANCA-associated vasculitis patients: a nested case-control study. Rheumatology 60, 1717-1723, 2021

  • Nakai K, Tsurutani Y, Inoue K, Matsui S, Makita K, Yamazaki Y, Sasano H, Makita N, Nangaku M, Saito J, Omura M, Nishikawa T. Steroidogenic Activity in Unresected Adrenals Associated With Surgical Outcomes in Primary Aldosteronism. Hypertension 77, 1638-1646, 2021

  • Oki R, Tsuji S, Hamasaki Y, Komaru Y, Miyamoto Y, Matsuura R, Yamada D, Doi K, Kume H, Nangaku M. Time until treatment initiation is associated with catheter survival in peritoneal dialysis-related peritonitis. Sci Rep 11, 6547, 2021

  • Nangaku M, Kondo K, Ueta K, Kokado Y, Kaneko G, Matsuda H, Kawaguchi Y, Komatsu Y. Efficacy and safety of vadadustat compared with darbepoetin alfa in japanese anemic patients on hemodialysis: A phase 3, multicenter, randomized, double-blind study. Nephrol Dial Transplant 36, 1731-1741, 2021

  • Nangaku M, Hamano T, Akizawa T, Tsubakihara Y, Nagai R, Okuda N, Kurata K, Nagakubo T, Jones NP, Endo Y, Cobitz AR. Daprodustat Compared with Epoetin Beta Pegol for Anemia in Japanese Patients Not on Dialysis: A 52-Week Randomized Open-Label Phase 3 Trial. Am J Nephrol 52, 26-35, 2021

  • Okada A, Ono S, Yamaguchi S, Yamana H, Ikeda Kurakawa K, Michihata N, Matsui H, Nangaku M, Yamauchi T, Yasunaga H, Kadowaki T. Association between nutritional guidance or ophthalmological examination and discontinuation of physician visits in patients with newly diagnosed diabetes: a retrospective cohort study using a nationwide database. J Diabetes Investig 12, 1619-1631, 2021

  • Tsuruya K, Hayashi T, Yamamoto H, Hase H, Nishi S, Yamagata K, Nangaku M, Wada T, Uemura Y, Ohashi Y, Hirakata H; RADIANCE-CKD Study Investigators. Renal prognoses by different target hemoglobin levels achieved by epoetin beta pegol dosing to chronic kidney disease patients with hyporesponsive anemia to erythropoiesis-stimulating agent: a multicenter open-label randomized controlled study. Clin Exp Nephrol 25, 456-466, 2021

  • Honda T, Hirakawa Y, Mizukami K, Yoshihara T, Tanaka T, Tobita S, Nangaku M. A distinctive distribution of hypoxia-inducible factor-1α in cultured renal tubular cells with hypoperfusion simulated by coverslip placement. Physiol Rep 9, e14689, 2021

  • Nangaku M, Kondo K, Takabe S, Ueta K, Kaneko G, Otsuka M, Kawaguchi Y, Komatsu Y. Vadadustat for anemia in chronic kidney disease on peritoneal dialysis: A phase 3 open-label study in Japan. Ther Apher Dial 25, 642-653, 2021

  • Kimura C, Oki R, Hamasaki Y, Nangaku M. An Abscess Developing in an Old Subcutaneous Tunnel after Catheter Diversion. Intern Med 60, 813-814, 2021

  • Kato H, Koga M, Kobayashi H, Maki H, Ikemura M, Kurokawa M, Nangaku M, Makita N, Ito N. Primary bone adult T cell lymphoma with multiple skeletal lesions and debilitating painful osteolysis: a case report. Osteoporos Int 32, 1013-1017, 2021

  • Hayashi T, Kato H, Tanabe K, Nangaku M, Hirakata H, Wada T, Sato H, Yamazaki Y, Masaki T, Kagimura T, Yamamoto H, Hase H, Kamouchi M, Imai E, Mizuno K, Iwasaki M, Akizawa T, Tsubakihara Y, Maruyama S, Narita I. Initial responsiveness to darbepoetin alfa and its contributing factors in non-dialysis chronic kidney disease patients in Japan. Clin Exp Nephrol 25, 110-119, 2021

  • Tanaka M, Ishibashi Y, Hamasaki Y, Kamijo Y, Idei M, Nishi T, Takeda M, Nonaka H, Nangaku M, Mise N. Ultrafiltration volume by once-weekly hemodialysis is a predictor of technique survival of combination therapy with peritoneal dialysis and hemodialysis. Ther Apher Dial 25, 82-89, 2021

  • "Potential contribution of intrinsic developmental stability toward body plan conservation. Yui Uchida*, Shuji Shigenobu, Hiroyuki Takeda, Chikara Furusawa & Naoki Irie* BMC Biology (2022) 20, 82 "

  • "Distinguishing Evolutionary Conservation from Derivedness. Jason Cheok Kuan Leong*, Masahiro Uesaka, Naoki Irie* Life (2022) 12(3), 440. "

  • "Whole embryonic detection of maternal microchimeric cells highlights significant differences in their numbers among individuals. Kana Fujimoto*, Akira Nakajima, Shohei Hori, Naoki Irie* PLOS ONE (2021) 16(12): e0261357 "

  • "Derivedness Index for Estimating Degree of Phenotypic Evolution of Embryos: A Study of Comparative Transcriptomic Analyses of Chordates and Echinoderms. Jason Cheok Kuan Leong*, Yongxin Li, Masahiro Uesaka, Yui Uchida, Akihito Omori, Meng Hao, Wenting Wan, Yang Dong, Yandong RenSi Zhang, Tao Zeng, Fayou Wang6, Luonan Chen, Gary Wessel, Brian T. Livingston, Cynthia Bradham, Wen Wang, Naoki Irie* Front. Cell Dev. Biol. (2021) https://doi.org/10.3389/fcell.2021.749963"

  • A. Hiramoto, J. Jonaitis, S. Niki, H. Kohsaka, RD. Fetter, A. Cardona, SR. Pulver and A. Nose. Regulation of coordinated muscular relaxation by a pattern-regulating intersegmental circuit. Nat. Commun; 12:2943 (2021)

  • Y. Matsuo, A. Nose and H. Kohsaka. Interspecies variation of larval locomotion kinematics in the genus Drosophila and its relation to habitat temperature. BMC Biology 19:176 (2021)

  • X. Zeng, Y. Komanome, T. Kawasaki, K. Inada, J. Jonaitis, SR. Pulver, H. Kazama and A. Nose. An electrically coupled pioneer circuit enables motor development via proprioceptive feedback in Drosophila embryos. Current Biology 31, 5327-5340.e5 (2021)

  • K. Fukumasu, A. Nose and H. Kohsaka. Extraction of bouton-like structures from neuropil calcium imaging data. bioRxiv (2021)

  • Candice L. Wike, Yixuan Guo, Mengyao Tan, Ryohei Nakamura, Dana Klatt Shaw, Noelia Díaz, Aneasha F. Whittaker-Tademy, Neva C. Durand, Erez Lieberman Aiden, Juan M. Vaquerizas, David Grunwald, Hiroyuki Takeda, Bradley R. Cairns, Chromatin architecture transitions from zebrafish sperm through early embryogenesis. Genome Research, 31:981-994. (2021).

  • Ryohei Nakamura, Yuichi Motai, Masahiko Kumagai, Candice L. Wike, Haruyo Nishiyama, Yoichiro Nakatani, Neva C. Durand, Kaori Kondo, Takashi Kondo, Tatsuya Tsukahara, Atsuko Shimada, Bradley R. Cairns, Erez Lieberman Aiden, Shinichi Morishita, Hiroyuki Takeda, CTCF looping is established during gastrulation in medaka embryos. Genome Research, 31:968-980. (2021).

  • Xiaotong Wu, Hongmei Zhang, Bingjie Zhang, Yu Zhang, Qiuyan Wang, Weimin Shen, Xi Wu, Lijia Li, Weikun Xia, Ryohei Nakamura, Bofeng Liu, Feng Liu, Hiroyuki Takeda, Anming Meng, Wei Xie, Methylome inheritance and enhancer dememorization reset an epigenetic gate safeguarding embryonic programs. Science Advances, Dec 24;7(52):eabl3858. (2021).

  • K. Harusawa, C. Watanabe, Y. Kobori, K. Tomita, A. Kitamura, M. Kinjo, M. Yanagisawa. Membrane surface modulates slow diffusion in small crowded droplets. Langmuir.37, 437–444 (2021) (doi: 10.1021/acs.langmuir.0c03086)

  • Y. Kurashina, M. Tsuchiya, A. Sakai, T. Maeda, Y. Jung Heo, F. Rossi, N. Choi, M. Yanagisawa, H. Onoe. Simultaneous crosslinking induces macroscopically phase-separated microgel from a homogeneous mixture of multiple polymers. Applied Materials Today. 22, 100937 (2021) (doi: 10.1016/j.apmt.2021.100937)

  • E. Shinohara, C. Watanabe, M. Yanagisawa. Perpendicular alignment of the phase-separated boundary in adhered polymer droplets. Soft Matter, 17, 9499-9506 (2021) (doi: 10.1039/D1SM01180D)

  • C. Watanabe, M. Yanagisawa. Evaporation patterns of dextran-poly(ethylene glycol) droplets with changes in wettability and compatibility. Life.12, 373 (2022)

  • Mano T., Murata K., Kon K., Shimizu C., Ono H., Shi S., Yamada R.G., Miyamichi K., Susaki E.A., Touhara K., Ueda H.R. CUBIC-Cloud provides an integrative computational framework toward community-driven whole-mouse-brain mapping Cell Rep. Methods 36, 100038 (2021)

  • Ode K.L., Shi S., Katori M., Mitsui K., Takanashi S., Oguchi R., Aoki D., Ueda H.R. A jerk-based algorithm ACCEL for the accurate classification of sleep–wake states from arm acceleration iScience 25, 103727 (2022)

  • Yamada T., Shi S., Ueda H.R. A design principle of spindle oscillations in mammalian sleep. iScience 25, 103873 (2022)

  • Katori M., Shi S., Ode K.L., Tomita Y., Ueda H.R. The 103,200-arm acceleration dataset in the UK Biobank revealed a landscape of human sleep phenotypes Proc. Natl. Acad. Sci. U.S.A. 119, e2116729119 (2022)

  • "Fluorescence intensity changes depending on viscoelasticity of lipid shell coating microbubbles labelled with an indocyanine green derivative K. Yoshida, M. Ebata, C. Kaneko, Y. Zhang, Y. Shibata, K. Saito, T. Toyota, H. Hayashi, T. Yamaguchi Japanese Journal of Applied Physics 60(SD) SDDE10-SDDE10 (2021)"

  • Ishihara S, Sato T, Sugioka R, Miwa R, Saito H, Sato R, Fukuyama H, Nakajima A, Sawai S, Kotani A, Katagiri K. Rap1 is essential for B-cell locomotion, germinal center formation and normal B-1a cell population. Front. Immunol. 12, 624419-624419 (2021年)

  • Daisuke Imoto, Nen Saito, Akihiko Nakajima, Gen Honda, Motohiko Ishida, Toyoko Sugita, Sayaka Ishihara, Koko Katagiri, Chika Okimura, Yoshiaki Iwadate, Satoshi Sawai. Comparative mapping of crawling-cell morphodynamics in deep learning-based feature space. PLOS Computational Biology 17(8), e1009237-e1009237 (2021)

  • Nen Saito, Satoshi Sawai. Three-dimensional morphodynamic simulations of macropinocytic cups. iScience 103087-103087 (2021)

  • Kei Yamamoto, Haruko Miura, Motohiko Ishida, Yusuke Mii, Noriyuki Kinoshita, Shinji Takada, Naoto Ueno, Satoshi Sawai, Yohei Kondo, Kazuhiro Aoki. Optogenetic relaxation of actomyosin contractility uncovers mechanistic roles of cortical tension during cytokinesis. Nature Communications12(1), (2021)

  • Gen Honda, Nen Saito, Taihei Fujimori, Hidenori Hashimura, Mitsuru J. Nakamura, Akihiko Nakajima, Satoshi Sawai. Microtopographical guidance of macropinocytic signaling patches. Proceedings of the National Academy of Sciences 118(50), e2110281118-e2110281118 (2021)


会議録 （Conference proceedings)
  • Seohyun Lee, Hyuno Kim, Hideo Higuchi, and Masatoshi Ishikawa. Classification of Metastatic Breast Cancer Cell using Deep Learning Approach. IEEE ICAIIC) (2021)
  • Seohyun Lee, Hyuno Kim, Hideo Higuchi, and Masatoshi Ishikawa. A Machine Learning Approach to Transport Categorization for Vesicle Tracking Data Analysis. Proc. SPIE 11647, 116470W. (2021)
  • Teppei Otsuka, Komei Kurasawa, Zengchao Duan, Aohan Li, Koya Sato, Hiroki Takesue, Kazuyuki Aihara, Kensuke Inaba, Mikio Hasegawa: "Coherent Ising Machine Based Optimal Channel Allocation and User Pairing in NOMA Networks," Proceedings of the 2021 International Conference on Artificial Intelligence in Information and Communication (ICAIIC), doi: 10.1109/ICAIIC51459.2021.9415221, pp.1-4 (2021).
  • Seiji Uenohara and Kazuyuki Aihara: "CMOS Mixed-Signal Spiking Neural Network Circuit Using a Time-Domain Digital-To-Analog Converter," Proceedings of the 2021 IEEE International Symposium on Circuits and Systems (ISCAS), doi: 10.1109/ISCAS51556.2021.9401230, pp.1-5 (2021).
  • Nina Sviridova, Pietro Artoni, Michela Fagiolini, Takao K. Hensch, and Kazuyuki Aihara: "Dynamical Characteristics of Wild-Type Mouse Spontaneous Pupillary Fluctuations*," Proceedings of the 2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 853-856 (2021).

総説解説 （Reviews)
  • 金子邦彦. 「表現型の揺らぎと進化の方向性」. 生物の科学 遺伝 2022年1月号(vol.76) 60-65. 2022
  • 金子 邦彦. 「普遍生物学」. 数理科学11月号　51-57. 2021
  • 山岸純平、斉藤稔、金子邦彦.「代謝漏出による微生物の共存共栄戦略」. 生物物理　61. 400-403. 2021
  • 金子 邦彦.「普遍生物学：小松さんへのレポート」.　現代思想（10月号、総特集、小松左京）　218-226. 2021
  • 今井正幸, 古賀信康, 佐甲靖志, 原田慶恵, 古澤力, 澤井哲, 田口英樹: 「生物物理」刊行 60 周年記念　連続座談会 III 生物物理学の概念と展望, 生物物理 2021
  • "伊藤創祐, 吉村耕平 “化学反応ネットワーク上の化学熱力学と情報幾何学” 生体の科学 Vol.72 No.3-2021 May-Jun. [特集] 生物物理学の進歩-生命現象の定量的理解に向けて. 公益財団法人金原一郎記念医学医療振興財団/医学書院 (2021)."
  • "Furubayashi, T., Ichihashi, N. How evolution builds up complexity?: In vitro evolution approaches to witness complexification in artificial molecular replication systems Biophysics and Physicobiology, 19, e190005 (2022)"
  • "市橋伯一　　 生きていなくても進化する―自己複製RNAを使った進化の理解 生命の科学　遺伝 76（1），21-25（2021）"
  • "古林太郎、市橋伯一　　 人工RNA複製システムの実験進化による物質から生命への複雑化プロセスの探求 生物物理 61（4），240-244（2021）"
  • "Mizuuchi, R.*, Ichihashi, N.* Primitive Compartmentalization for the Sustainable Replication of Genetic Molecules. Life 11, 191(2021)."
  • 中村絢斗, 小林徹也,大腸菌走化性における感知・応答の情報論的な最適性,生体の科学, 72(3), p.239-244, 2021
  • 杉村薫 力を計測して生き物の形づくりを解き明かす 高分子 70: 417, 2021
  • Fukui K, Tanaka T, Nangaku M. Enarodustat to treat anemia in chronic kidney disease. Drugs Today 57, 491-497, 2021
  • Silva Junior G, Gadonski G, Ferreiro Fuentes A, Nangaku M, Remuzzi G, Ronco C. The Future of Nephrology and Public Health. Contrib Nephrol 199, 339-350, 2021
  • Kitai Y, Nangaku M, Yanagita M. Aging-Related Kidney Diseases. Contrib Nephrol 199, 266-273, 2021
  • Eslam M, Ahmed A, Després JP, Jha V, Halford JCG, Wei Chieh JT, Harris DCH, Nangaku M, Colagiuri S, Targher G, Joshi S, Byrne CD, Khunti K, Nguyen MH, Gish RG, George J. Incorporating fatty liver disease in multidisciplinary care and novel clinical trial designs for patients with metabolic diseases. Lancet Gastroenterol Hepatol 6, 743-753, 2021
  • Ishii T, Tanaka T, Nangaku M. Profile of Daprodustat in the Treatment of Renal Anemia Due to Chronic Kidney Disease. Ther Clin Risk Manag 17, 155-163, 2021
  • Nangaku M, Kadowaki T, Yotsuyanagi H, Ohmagari N, Egi M, Sasaki J, Sakamoto T, Hasegawa Y, Ogura T, Chiba S, Node K, Suzuki R, Yamaguchi Y, Murashima A, Ikeda N, Morishima E, Yuzawa K, Moriuchi H, Hayakawa S, Nishi D, Irisawa A, Miyamoto T, Suzuki H, Sone H, Fujino Y. The Japanese Medical Science Federation COVID-19 Expert Opinion. JMA Journal 4, 148-162, 2021
  • Yap DYH, McMahon LP, Hao CM, Hu N, Okada H, Suzuki Y, Kim SG, Lim SK, Vareesangthip K, Hung CC, Nangaku M; APSN HIF-PHI Recommendation Committee. Recommendations by the Asian Pacific society of nephrology (APSN) on the appropriate use of HIF-PH inhibitors. Nephrology (Carlton) 26, 105-118, 2021
  • Nangaku M, Fogo AB. Does a preclinical randomized controlled trial, pRCT, resolve the gap between animal studies and human trial? Kidney Int 99, 1262-1264, 2021
  • Nangaku M, Wanner C. Not only incretins for diabetic kidney disease-beneficial effects by DPP-4 inhibitors. Kidney Int 99, 318-322, 2021
  • Ronco P, Rovin B, Nangaku M, Wyatt C, Jha V; Associate Editors, for the Entire Editorial Team. Milestones in nephrology and welcoming the future: the 61st anniversary of the International Society of Nephrology. Kidney Int 99, 2-4, 2021
  • 生物の科学　遺伝 2022 1月号　（エヌ・ティー・エス）
  • 柳澤実穂　「水-油界面で閉じ込められた不思議な環境」リバネス・研究応援，22: 8-9（2021年6月発行）
  • 柳澤実穂　「研究室紹介」日本化学会コロイド界面部会の学会誌，C&I Commun. 46 (2), 42-45 (2021)
  • 冨田一甫, 渡邊千穂, 柳澤実穂　「細胞サイズ空間での相分離から細胞内相分離へ」実験医学, 増刊号39 (10) (2021年6月出版）
  • 柳澤実穂　「細胞サイズスケールの相転移・相分離ー生物学における相分離の熱狂と物理学への逆輸入－」物理科学 この1年 2022, 編: パリティ編集委員会, 162-165(2022)
  • Minami Y., Yuan Y., Ueda H.R. Towards organism-level systems biology by next-generation genetics and whole-organ cell profiling. Biophys. Rev. 13, 1113-1126 (2021)
  • Richardson D.S., Guan W., Matsumoto K., Pan C., Chung K., Ertürk A., Ueda H.R., Lichtman J.W. TISSUE CLEARING. Nat. Rev. Methods Primers 1, 84 (2021)
  • Sacconi L., Ueda H.R., Pagès S., Silvestri L. Fluorescence tissue microscopy Prog. Biophys. Mol. Biol. 41, e110157 (2022)
  • Minami Y., Yuan Y., Ueda H.R. High-throughput Genetically Modified Animal Experiments Achieved by Next-generation Mammalian Genetics. J. Biol. Rhythms. 37, 135-151 (2022)
  • T. Toyota, A. Ohtani, H. Sugiyama, Molecular transformation for self-reproducing vesicles and underlying analysis methods, Chemical and Pharmaceutical Bulletin, 69, 947-952 (2021).
  • T. Toyota, Y. Zhang, H. Hayashi, The Use of Giant Vesicles for Medical Applications: A Trend in the Last Decade, Sensors and Materials, 33, 261-268 (2021).
  • 澤井 哲 「仮足と細胞極性の動力学コンセプト 」生体の科学 72(3) 245-249 (2021)

著書 （Books)
  • 分担執筆、金子邦彦、「普遍生物学」. 数理科学11月号　pp51-57(2021)
  • 古澤力: 微生物進化実験を用いた進化過程の定量解析, 生物の科学 遺伝 (2022 Jan); 76(1):26-31
  • 酒井邦嘉(編著)，合原一幸，辻子美保子，鶴岡慶雅，羽生善治，福井直樹：「脳とAI ー言語と思考へのアプローチ」， 中央公論新社 (2022). （合原一幸：第1章　脳とAI　「数理工学の方法論」，pp.28-36；鼎談― 酒井邦嘉，合原一幸，羽生善治：第1章　脳とAI　「人間とＡＩの棲み分けと融合」，「「詰み」とレーサーの感覚の共通点」，「AIは大局観を持てるか」，「文脈と共感」，「機能の理解が課題」，pp.47-63）
  • 　Y. Hayata, R. Ueki, S. Sando Feeder-Free Human Induced Pluripotent Stem Cell Culture Using a DNA Aptamer-Based Mimic of Basic Fibroblast Growth Factor. Methods in molecular biology (Clifton, N.J.) 2312 301-305 (2021)